Sample overview

Project Name TCGA-UVM
GSE ID GSE176029
GSM ID GSM5353203
Cell Line None
Tissue type liver
Disease Type liver metastasis of uveal melanoma
PMID 34470851
Initial gene number 33538
Initial cell number 6794880
Post-QC gene number 3945
Post-QC cell number 416

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions