Sample overview

Project Name TCGA-UVM
GSE ID GSE139829
GSM ID GSM4147101
Cell Line None
Tissue type Eye
Disease Type human uveal melanoma_primary
PMID 31980621
Initial gene number 33694
Initial cell number 737280
Post-QC gene number 5674
Post-QC cell number 565

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions