Sample overview

Project Name TCGA-STAD
GSE ID GSE163558
GSM ID GSM5004184
Cell Line None
Tissue type lymph node
Disease Type gastric cancer lymph node metastasis
PMID 35184420
Initial gene number 33538
Initial cell number 4227
Post-QC gene number 5250
Post-QC cell number 3867

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions