Sample overview

Project Name TCGA-SKCM
GSE ID GSE212945
GSM ID GSM6564299
Cell Line None
Tissue type Skin
Disease Type Melanoma brain metastatis
PMID 37433798
Initial gene number 46223
Initial cell number 1452
Post-QC gene number 4785
Post-QC cell number 1010

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions