Sample overview

Project Name TCGA-READ
GSE ID GSE221575
GSM ID GSM6886540
Cell Line None
Tissue type liver metastasis of colorectal cancer
Disease Type ⅣA
PMID 38253219
Initial gene number 29292
Initial cell number 5337
Post-QC gene number 6758
Post-QC cell number 2017

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions