Sample overview

Project Name TCGA-READ
GSE ID GSE205506
GSM ID GSM6213972
Cell Line None
Tissue type colon
Disease Type tumor
PMID 37172580
Initial gene number 33538
Initial cell number 4826
Post-QC gene number 9083
Post-QC cell number 122

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions