Sample overview
| Project Name |
TCGA-PRAD
|
| GSE ID |
GSE237602
|
| GSM ID |
GSM7634626
|
| Cell Line |
PC35-1
|
| Tissue type |
None
|
| Disease Type |
prostate cancer
|
| PMID |
\
|
| Initial gene number |
36601
|
| Initial cell number |
5094
|
| Post-QC gene number |
9556
|
| Post-QC cell number |
93
|
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster
vs
There are no results of the analysis here
Overall Survival : Cluster
vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster
vs
There
are no results of the analysis here
Tumor Size : Cluster
vs
There
are no results of the analysis here
Lymph Node Involvement : Cluster
vs
There
are no results of the analysis here
Distant Metastasis : Cluster
vs
There
are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type |
Ligand |
Receiving Cell Type |
Receptor |
Score |
P-value |
Pathway Name |
Function |
Evidence |
| Erythrocytes(Nos)_source |
BMP2_ligand |
Erythrocytes(Nos)_target |
BMPR1B_BMPR2_receptor |
5.769e-04 |
0.0 |
BMP |
Secreted Signaling |
KEGG: hsa04350; PMID:26893264 |
| Erythrocytes(Nos)_source |
IGF1_ligand |
Epithelial,cells(Nos)_target |
IGF1R_receptor |
3.012e-07 |
0.03 |
IGF |
Secreted Signaling |
PMID: 14604834 |
| Erythrocytes(Nos)_source |
IGF1_ligand |
Erythrocytes(Nos)_target |
IGF1R_receptor |
6.922e-07 |
0.0 |
IGF |
Secreted Signaling |
PMID: 14604834 |
| Erythrocytes(Nos)_source |
TNFSF12_ligand |
Epithelial,cells(Nos)_target |
TNFRSF12A_receptor |
6.185e-08 |
0.0 |
TWEAK |
Secreted Signaling |
KEGG: hsa04060 |
| Erythrocytes(Nos)_source |
TNFSF12_ligand |
Erythrocytes(Nos)_target |
TNFRSF12A_receptor |
5.742e-06 |
0.0 |
TWEAK |
Secreted Signaling |
KEGG: hsa04060 |
| Erythrocytes(Nos)_source |
NAMPT_ligand |
Epithelial,cells(Nos)_target |
INSR_receptor |
1.444e-06 |
0.0 |
VISFATIN |
Secreted Signaling |
PMID: 28490838 |
| Erythrocytes(Nos)_source |
NAMPT_ligand |
Erythrocytes(Nos)_target |
INSR_receptor |
3.193e-06 |
0.0 |
VISFATIN |
Secreted Signaling |
PMID: 28490838 |
| Erythrocytes(Nos)_source |
MDK_ligand |
Erythrocytes(Nos)_target |
ITGA6_ITGB1_receptor |
8.743e-04 |
0.0 |
MK |
Secreted Signaling |
PMID: 28356350 |
| Erythrocytes(Nos)_source |
MDK_ligand |
Epithelial,cells(Nos)_target |
LRP1_receptor |
1.665e-04 |
0.0 |
MK |
Secreted Signaling |
PMID: 28356350 |
| Erythrocytes(Nos)_source |
MDK_ligand |
Erythrocytes(Nos)_target |
LRP1_receptor |
1.965e-04 |
0.0 |
MK |
Secreted Signaling |
PMID: 28356350 |
| Erythrocytes(Nos)_source |
GRN_ligand |
Epithelial,cells(Nos)_target |
SORT1_receptor |
1.920e-05 |
0.0 |
GRN |
Secreted Signaling |
PMID: 29555433 |
| Erythrocytes(Nos)_source |
GRN_ligand |
Erythrocytes(Nos)_target |
SORT1_receptor |
2.126e-04 |
0.0 |
GRN |
Secreted Signaling |
PMID: 29555433 |
| Erythrocytes(Nos)_source |
LAMC1_ligand |
Erythrocytes(Nos)_target |
ITGA6_ITGB1_receptor |
3.602e-04 |
0.0 |
LAMININ |
ECM-Receptor |
KEGG: hsa04512 |
| Erythrocytes(Nos)_source |
LAMC1_ligand |
Epithelial,cells(Nos)_target |
CD44_receptor |
1.103e-06 |
0.0 |
LAMININ |
ECM-Receptor |
KEGG: hsa04512 |
| Erythrocytes(Nos)_source |
LAMC1_ligand |
Erythrocytes(Nos)_target |
CD44_receptor |
3.947e-05 |
0.0 |
LAMININ |
ECM-Receptor |
KEGG: hsa04512 |
| Erythrocytes(Nos)_source |
LAMC1_ligand |
Erythrocytes(Nos)_target |
DAG1_receptor |
4.101e-05 |
0.0 |
LAMININ |
ECM-Receptor |
KEGG: hsa04512 |
| Erythrocytes(Nos)_source |
CD99_ligand |
Erythrocytes(Nos)_target |
CD99_receptor |
9.221e-03 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Nos)_source |
CD99_ligand |
Erythrocytes(Nos)_target |
CD99L2_receptor |
7.088e-04 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Nos)_source |
CDH2_ligand |
Epithelial,cells(Nos)_target |
CDH2_receptor |
1.135e-07 |
0.0 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Epithelial,cells(Nos)_source |
CDH2_ligand |
Erythrocytes(Nos)_target |
CDH2_receptor |
1.135e-07 |
0.0 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Nos)_source |
CDH2_ligand |
Erythrocytes(Nos)_target |
CDH2_receptor |
1.438e-05 |
0.0 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Nos)_source |
CDH1_ligand |
Erythrocytes(Nos)_target |
CDH1_receptor |
1.204e-07 |
0.0 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Epithelial,cells(Nos)_source |
EFNA1_ligand |
Erythrocytes(Nos)_target |
EPHA4_receptor |
3.882e-08 |
0.04 |
EPHA |
Cell-Cell Contact |
PMID: 15114347 |
| Erythrocytes(Nos)_source |
EFNA1_ligand |
Erythrocytes(Nos)_target |
EPHA4_receptor |
1.697e-05 |
0.0 |
EPHA |
Cell-Cell Contact |
PMID: 15114347 |
| Erythrocytes(Nos)_source |
EFNB3_ligand |
Erythrocytes(Nos)_target |
EPHA4_receptor |
9.074e-06 |
0.0 |
EPHB |
Cell-Cell Contact |
PMID: 15114347 |
| Erythrocytes(Nos)_source |
F11R_ligand |
Erythrocytes(Nos)_target |
F11R_receptor |
4.163e-05 |
0.0 |
JAM |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Nos)_source |
MPZL1_ligand |
Erythrocytes(Nos)_target |
MPZL1_receptor |
4.203e-05 |
0.0 |
MPZ |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Nos)_source |
NCAM1_ligand |
Erythrocytes(Nos)_target |
NCAM1_receptor |
2.556e-04 |
0.01 |
NCAM |
Cell-Cell Contact |
KEGG: hsa04514 |