Sample overview
| Project Name |
TCGA-PRAD
|
| GSE ID |
GSE225021
|
| GSM ID |
GSM7037220
|
| Cell Line |
C4-2B
|
| Tissue type |
None
|
| Disease Type |
prostate cancer
|
| PMID |
\
|
| Initial gene number |
36601
|
| Initial cell number |
10001
|
| Post-QC gene number |
14426
|
| Post-QC cell number |
2200
|
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster
vs
There are no results of the analysis here
Overall Survival : Cluster
vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster
vs
There
are no results of the analysis here
Tumor Size : Cluster
vs
There
are no results of the analysis here
Lymph Node Involvement : Cluster
vs
There
are no results of the analysis here
Distant Metastasis : Cluster
vs
There
are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type |
Ligand |
Receiving Cell Type |
Receptor |
Score |
P-value |
Pathway Name |
Function |
Evidence |
| Erythrocytes(Nos)_source |
EGF_ligand |
Epithelial,cells(Nos)_target |
EGFR_ERBB2_receptor |
3.283e-04 |
0.0 |
EGF |
Secreted Signaling |
KEGG: hsa04012 |
| Epithelial,cells(Nos)_source |
MDK_ligand |
Erythrocytes(Nos)_target |
ITGA6_ITGB1_receptor |
8.370e-04 |
0.0 |
MK |
Secreted Signaling |
PMID: 28356350 |
| Erythrocytes(Nos)_source |
F11R_ligand |
Epithelial,cells(Nos)_target |
F11R_receptor |
1.826e-04 |
0.0 |
JAM |
Cell-Cell Contact |
KEGG: hsa04514 |
| Epithelial,cells(Nos)_source |
F11R_ligand |
Erythrocytes(Nos)_target |
F11R_receptor |
1.826e-04 |
0.0 |
JAM |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Nos)_source |
F11R_ligand |
Erythrocytes(Nos)_target |
F11R_receptor |
2.737e-05 |
0.0 |
JAM |
Cell-Cell Contact |
KEGG: hsa04514 |