Sample overview
| Project Name | TCGA-PRAD |
| GSE ID | GSE153892 |
| GSM ID | GSM4658185 |
| Cell Line | None |
| Tissue type | prostate |
| Disease Type | prostatic adenocarcinoma |
| PMID | 34919143 |
| Initial gene number | 33538 |
| Initial cell number | 2598 |
| Post-QC gene number | 1270 |
| Post-QC cell number | 2389 |
QC Metrics
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster vs
There are no results of the analysis here
Overall Survival : Cluster vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster vs
There are no results of the analysis here
Tumor Size : Cluster vs
There are no results of the analysis here
Lymph Node Involvement : Cluster vs
There are no results of the analysis here
Distant Metastasis : Cluster vs
There are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type | Ligand | Receiving Cell Type | Receptor | Score | P-value | Pathway Name | Function | Evidence |
|---|---|---|---|---|---|---|---|---|
| CD4+,T-cells(Nos)_source | MIF_ligand | CD4+,T-cells(Nos)_target | CD74_CXCR4_receptor | 2.972e-05 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 24760155 |
| CD8+,T-cells(Nos)_source | MIF_ligand | CD4+,T-cells(Nos)_target | CD74_CXCR4_receptor | 4.783e-04 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 24760155 |
| Macrophages(Nos)_source | MIF_ligand | CD4+,T-cells(Nos)_target | CD74_CXCR4_receptor | 7.343e-05 | 0.01 | MIF | Secreted Signaling | PMID: 29637711; PMID: 24760155 |
| NK,cells(Nos)_source | MIF_ligand | CD4+,T-cells(Nos)_target | CD74_CXCR4_receptor | 7.969e-05 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 24760155 |
| CD4+,T-cells(Nos)_source | MIF_ligand | Macrophages(Nos)_target | CD74_CXCR4_receptor | 7.389e-05 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 24760155 |
| CD8+,T-cells(Nos)_source | MIF_ligand | Macrophages(Nos)_target | CD74_CXCR4_receptor | 1.190e-03 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 24760155 |
| Macrophages(Nos)_source | MIF_ligand | Macrophages(Nos)_target | CD74_CXCR4_receptor | 1.826e-04 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 24760155 |
| NK,cells(Nos)_source | MIF_ligand | Macrophages(Nos)_target | CD74_CXCR4_receptor | 1.982e-04 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 24760155 |
| CD4+,T-cells(Nos)_source | MIF_ligand | NK,cells(Nos)_target | CD74_CXCR4_receptor | 6.969e-05 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 24760155 |
| CD8+,T-cells(Nos)_source | MIF_ligand | NK,cells(Nos)_target | CD74_CXCR4_receptor | 1.122e-03 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 24760155 |
| Macrophages(Nos)_source | MIF_ligand | NK,cells(Nos)_target | CD74_CXCR4_receptor | 1.722e-04 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 24760155 |
| NK,cells(Nos)_source | MIF_ligand | NK,cells(Nos)_target | CD74_CXCR4_receptor | 1.869e-04 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 24760155 |
| CD4+,T-cells(Nos)_source | MIF_ligand | CD4+,T-cells(Nos)_target | CD74_CD44_receptor | 1.992e-05 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 26175090 |
| CD8+,T-cells(Nos)_source | MIF_ligand | CD4+,T-cells(Nos)_target | CD74_CD44_receptor | 3.209e-04 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 26175090 |
| Macrophages(Nos)_source | MIF_ligand | CD4+,T-cells(Nos)_target | CD74_CD44_receptor | 4.920e-05 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 26175090 |
| NK,cells(Nos)_source | MIF_ligand | CD4+,T-cells(Nos)_target | CD74_CD44_receptor | 5.343e-05 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 26175090 |
| CD4+,T-cells(Nos)_source | MIF_ligand | Macrophages(Nos)_target | CD74_CD44_receptor | 3.229e-06 | 0.01 | MIF | Secreted Signaling | PMID: 29637711; PMID: 26175090 |
| CD8+,T-cells(Nos)_source | MIF_ligand | Macrophages(Nos)_target | CD74_CD44_receptor | 5.210e-05 | 0.01 | MIF | Secreted Signaling | PMID: 29637711; PMID: 26175090 |
| Macrophages(Nos)_source | MIF_ligand | Macrophages(Nos)_target | CD74_CD44_receptor | 7.967e-06 | 0.01 | MIF | Secreted Signaling | PMID: 29637711; PMID: 26175090 |
| NK,cells(Nos)_source | MIF_ligand | Macrophages(Nos)_target | CD74_CD44_receptor | 8.665e-06 | 0.01 | MIF | Secreted Signaling | PMID: 29637711; PMID: 26175090 |
| CD4+,T-cells(Nos)_source | MIF_ligand | NK,cells(Nos)_target | CD74_CD44_receptor | 3.083e-05 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 26175090 |
| CD8+,T-cells(Nos)_source | MIF_ligand | NK,cells(Nos)_target | CD74_CD44_receptor | 4.969e-04 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 26175090 |
| Macrophages(Nos)_source | MIF_ligand | NK,cells(Nos)_target | CD74_CD44_receptor | 7.610e-05 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 26175090 |
| NK,cells(Nos)_source | MIF_ligand | NK,cells(Nos)_target | CD74_CD44_receptor | 8.270e-05 | 0.0 | MIF | Secreted Signaling | PMID: 29637711; PMID: 26175090 |
| CD8+,T-cells(Nos)_source | CD99_ligand | CD8+,T-cells(Nos)_target | CD99_receptor | 5.205e-02 | 0.0 | CD99 | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | CD99_ligand | CD8+,T-cells(Nos)_target | CD99_receptor | 1.284e-02 | 0.0 | CD99 | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | CD99_ligand | NK,cells(Nos)_target | CD99_receptor | 1.284e-02 | 0.0 | CD99 | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | CD99_ligand | NK,cells(Nos)_target | CD99_receptor | 3.131e-03 | 0.0 | CD99 | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | LCK_ligand | CD8+,T-cells(Nos)_target | CD8 receptor_receptor | 2.225e-02 | 0.0 | LCK | Cell-Cell Contact | PMID: 25427562 |
| NK,cells(Nos)_source | LCK_ligand | CD8+,T-cells(Nos)_target | CD8 receptor_receptor | 3.954e-03 | 0.0 | LCK | Cell-Cell Contact | PMID: 25427562 |
| CD4+,T-cells(Nos)_source | HLA-A_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 3.048e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | HLA-A_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 4.404e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| Macrophages(Nos)_source | HLA-A_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 7.271e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | HLA-A_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 9.039e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD4+,T-cells(Nos)_source | HLA-B_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 3.022e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | HLA-B_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 4.390e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| Macrophages(Nos)_source | HLA-B_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 7.462e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | HLA-B_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 9.038e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD4+,T-cells(Nos)_source | HLA-C_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 2.925e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | HLA-C_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 4.526e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| Macrophages(Nos)_source | HLA-C_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 7.299e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | HLA-C_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 9.400e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD4+,T-cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 4.072e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 5.654e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| Macrophages(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 1.103e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 1.172e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD4+,T-cells(Nos)_source | HLA-F_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 7.131e-04 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | HLA-F_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 1.134e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | HLA-F_ligand | CD8+,T-cells(Nos)_target | CD8A_receptor | 5.611e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | HLA-F_ligand | NK,cells(Nos)_target | CD8A_receptor | 4.409e-04 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD4+,T-cells(Nos)_source | HLA-A_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 4.446e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | HLA-A_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 6.403e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| Macrophages(Nos)_source | HLA-A_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 1.069e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | HLA-A_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 1.309e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD4+,T-cells(Nos)_source | HLA-B_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 4.410e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | HLA-B_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 6.383e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| Macrophages(Nos)_source | HLA-B_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 1.096e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | HLA-B_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 1.309e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD4+,T-cells(Nos)_source | HLA-C_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 4.275e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | HLA-C_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 6.572e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| Macrophages(Nos)_source | HLA-C_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 1.073e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | HLA-C_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 1.359e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD4+,T-cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 5.851e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 8.108e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| Macrophages(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 1.591e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 1.672e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD4+,T-cells(Nos)_source | HLA-F_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 1.078e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | HLA-F_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 1.710e-02 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| NK,cells(Nos)_source | HLA-F_ligand | CD8+,T-cells(Nos)_target | CD8B_receptor | 8.290e-03 | 0.0 | MHC-I | Cell-Cell Contact | KEGG: hsa04514 |
| CD8+,T-cells(Nos)_source | HLA-C_ligand | CD8+,T-cells(Nos)_target | KIR2DL3_receptor | 4.805e-02 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| NK,cells(Nos)_source | HLA-C_ligand | CD8+,T-cells(Nos)_target | KIR2DL3_receptor | 9.972e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| CD8+,T-cells(Nos)_source | HLA-C_ligand | NK,cells(Nos)_target | KIR2DL3_receptor | 9.756e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| NK,cells(Nos)_source | HLA-C_ligand | NK,cells(Nos)_target | KIR2DL3_receptor | 2.023e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| CD4+,T-cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | KLRC1_receptor | 2.887e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 24223577 |
| CD8+,T-cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | KLRC1_receptor | 4.013e-02 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 24223577 |
| NK,cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | KLRC1_receptor | 8.347e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 24223577 |
| CD4+,T-cells(Nos)_source | HLA-E_ligand | NK,cells(Nos)_target | KLRC1_receptor | 6.109e-04 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 24223577 |
| CD8+,T-cells(Nos)_source | HLA-E_ligand | NK,cells(Nos)_target | KLRC1_receptor | 8.489e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 24223577 |
| Macrophages(Nos)_source | HLA-E_ligand | NK,cells(Nos)_target | KLRC1_receptor | 1.651e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 24223577 |
| NK,cells(Nos)_source | HLA-E_ligand | NK,cells(Nos)_target | KLRC1_receptor | 1.764e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 24223577 |
| CD4+,T-cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | KLRC2_receptor | 5.649e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 26697006 |
| CD8+,T-cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | KLRC2_receptor | 7.830e-02 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 26697006 |
| Macrophages(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | KLRC2_receptor | 1.535e-02 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 26697006 |
| NK,cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | KLRC2_receptor | 1.615e-02 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 26697006 |
| CD4+,T-cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD94:NKG2A_receptor | 3.770e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| CD8+,T-cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD94:NKG2A_receptor | 5.236e-02 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| NK,cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD94:NKG2A_receptor | 1.086e-02 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| CD4+,T-cells(Nos)_source | HLA-E_ligand | NK,cells(Nos)_target | CD94:NKG2A_receptor | 8.196e-04 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| CD8+,T-cells(Nos)_source | HLA-E_ligand | NK,cells(Nos)_target | CD94:NKG2A_receptor | 1.138e-02 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| Macrophages(Nos)_source | HLA-E_ligand | NK,cells(Nos)_target | CD94:NKG2A_receptor | 2.221e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| NK,cells(Nos)_source | HLA-E_ligand | NK,cells(Nos)_target | CD94:NKG2A_receptor | 2.356e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| CD4+,T-cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD94:NKG2C_receptor | 5.254e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| CD8+,T-cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD94:NKG2C_receptor | 7.284e-02 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| Macrophages(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD94:NKG2C_receptor | 1.426e-02 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| NK,cells(Nos)_source | HLA-E_ligand | CD8+,T-cells(Nos)_target | CD94:NKG2C_receptor | 1.505e-02 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |
| NK,cells(Nos)_source | HLA-E_ligand | NK,cells(Nos)_target | CD94:NKG2C_receptor | 1.780e-03 | 0.0 | MHC-I | Cell-Cell Contact | PMID: 28484462 |