Sample overview
| Project Name |
TCGA-LUAD
|
| GSE ID |
GSE137912
|
| GSM ID |
GSM4094251
|
| Cell Line |
H358
|
| Tissue type |
None
|
| Disease Type |
lung adenocarcinoma
|
| PMID |
31915379
|
| Initial gene number |
32738
|
| Initial cell number |
1118
|
| Post-QC gene number |
3665
|
| Post-QC cell number |
502
|
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster
vs
There are no results of the analysis here
Overall Survival : Cluster
vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster
vs
There
are no results of the analysis here
Tumor Size : Cluster
vs
There
are no results of the analysis here
Lymph Node Involvement : Cluster
vs
There
are no results of the analysis here
Distant Metastasis : Cluster
vs
There
are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type |
Ligand |
Receiving Cell Type |
Receptor |
Score |
P-value |
Pathway Name |
Function |
Evidence |
| Epithelial,cells(Good)_source |
MDK_ligand |
Epithelial,cells(Poor)_target |
SDC2_receptor |
1.298e-02 |
0.0 |
MK |
Secreted Signaling |
PMID: 28356350 |
| Epithelial,cells(Nos)_source |
MDK_ligand |
Epithelial,cells(Poor)_target |
SDC2_receptor |
4.059e-03 |
0.0 |
MK |
Secreted Signaling |
PMID: 28356350 |
| Epithelial,cells(Poor)_source |
MDK_ligand |
Epithelial,cells(Poor)_target |
SDC2_receptor |
1.170e-02 |
0.0 |
MK |
Secreted Signaling |
PMID: 28356350 |
| Epithelial,cells(Nos)_source |
THBS1_ligand |
Epithelial,cells(Poor)_target |
CD47_receptor |
6.778e-04 |
0.0 |
THBS |
ECM-Receptor |
KEGG: hsa04512 |