Sample overview

Project Name TCGA-LGG
GSE ID GSE152273
GSM ID GSM4610548
Cell Line None
Tissue type Brain
Disease Type primary glioma
PMID 34586841
Initial gene number 32738
Initial cell number 901
Post-QC gene number 2643
Post-QC cell number 334

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions