Sample overview
| Project Name |
TCGA-LAML
|
| GSE ID |
GSE235923
|
| GSM ID |
GSM7512024
|
| Cell Line |
None
|
| Tissue type |
Bone Marrow
|
| Disease Type |
APL (AML with t(15;17)(q22;q12)) PML/RARA
|
| PMID |
37798266
|
| Initial gene number |
36613
|
| Initial cell number |
2214
|
| Post-QC gene number |
1565
|
| Post-QC cell number |
1264
|
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster
vs
There are no results of the analysis here
Overall Survival : Cluster
vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster
vs
There
are no results of the analysis here
Tumor Size : Cluster
vs
There
are no results of the analysis here
Lymph Node Involvement : Cluster
vs
There
are no results of the analysis here
Distant Metastasis : Cluster
vs
There
are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type |
Ligand |
Receiving Cell Type |
Receptor |
Score |
P-value |
Pathway Name |
Function |
Evidence |
| Erythrocytes(Nos)_source |
LGALS9_ligand |
CD4+,T-cells(Nos)_target |
CD44_receptor |
6.588e-05 |
0.0 |
GALECTIN |
Secreted Signaling |
PMID: 25065622 |
| Erythrocytes(Nos)_source |
LGALS9_ligand |
CD4+,T-cells(Poor)_target |
CD44_receptor |
1.178e-04 |
0.0 |
GALECTIN |
Secreted Signaling |
PMID: 25065622 |
| Erythrocytes(Nos)_source |
LGALS9_ligand |
Erythrocytes(Good)_target |
CD44_receptor |
4.339e-05 |
0.03 |
GALECTIN |
Secreted Signaling |
PMID: 25065622 |
| Erythrocytes(Nos)_source |
LGALS9_ligand |
Erythrocytes(Nos)_target |
CD44_receptor |
4.651e-04 |
0.0 |
GALECTIN |
Secreted Signaling |
PMID: 25065622 |
| CD4+,T-cells(Poor)_source |
CD99_ligand |
CD4+,T-cells(Poor)_target |
CD99_receptor |
2.393e-05 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Nos)_source |
CD99_ligand |
CD4+,T-cells(Poor)_target |
CD99_receptor |
2.067e-04 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Poor)_source |
CD99_ligand |
CD4+,T-cells(Poor)_target |
CD99_receptor |
1.086e-05 |
0.02 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| CD4+,T-cells(Poor)_source |
CD99_ligand |
Erythrocytes(Nos)_target |
CD99_receptor |
2.067e-04 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| CD4+,T-cells(Poor)_source |
CD99_ligand |
Erythrocytes(Poor)_target |
CD99_receptor |
1.086e-05 |
0.02 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |