Sample overview
| Project Name |
TCGA-LAML
|
| GSE ID |
GSE235923
|
| GSM ID |
GSM7512012
|
| Cell Line |
None
|
| Tissue type |
Bone Marrow
|
| Disease Type |
AML with mutated NPM1
|
| PMID |
37798266
|
| Initial gene number |
33538
|
| Initial cell number |
1431
|
| Post-QC gene number |
614
|
| Post-QC cell number |
805
|
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster
vs
There are no results of the analysis here
Overall Survival : Cluster
vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster
vs
There
are no results of the analysis here
Tumor Size : Cluster
vs
There
are no results of the analysis here
Lymph Node Involvement : Cluster
vs
There
are no results of the analysis here
Distant Metastasis : Cluster
vs
There
are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type |
Ligand |
Receiving Cell Type |
Receptor |
Score |
P-value |
Pathway Name |
Function |
Evidence |
| HSC(Poor)_source |
CD99_ligand |
HSC(Nos)_target |
CD99_receptor |
6.009e-03 |
0.03 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Monocytes(Poor)_source |
CD99_ligand |
HSC(Nos)_target |
CD99_receptor |
1.750e-02 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| HSC(Nos)_source |
CD99_ligand |
HSC(Poor)_target |
CD99_receptor |
6.009e-03 |
0.03 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| HSC(Poor)_source |
CD99_ligand |
HSC(Poor)_target |
CD99_receptor |
2.657e-03 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Monocytes(Good)_source |
CD99_ligand |
HSC(Poor)_target |
CD99_receptor |
3.794e-03 |
0.04 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Monocytes(Nos)_source |
CD99_ligand |
HSC(Poor)_target |
CD99_receptor |
1.058e-02 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Monocytes(Poor)_source |
CD99_ligand |
HSC(Poor)_target |
CD99_receptor |
7.739e-03 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| HSC(Poor)_source |
CD99_ligand |
Monocytes(Good)_target |
CD99_receptor |
3.794e-03 |
0.04 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Monocytes(Poor)_source |
CD99_ligand |
Monocytes(Good)_target |
CD99_receptor |
1.105e-02 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| HSC(Poor)_source |
CD99_ligand |
Monocytes(Nos)_target |
CD99_receptor |
1.058e-02 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Monocytes(Nos)_source |
CD99_ligand |
Monocytes(Nos)_target |
CD99_receptor |
4.208e-02 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Monocytes(Poor)_source |
CD99_ligand |
Monocytes(Nos)_target |
CD99_receptor |
3.082e-02 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| HSC(Nos)_source |
CD99_ligand |
Monocytes(Poor)_target |
CD99_receptor |
1.750e-02 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| HSC(Poor)_source |
CD99_ligand |
Monocytes(Poor)_target |
CD99_receptor |
7.739e-03 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Monocytes(Good)_source |
CD99_ligand |
Monocytes(Poor)_target |
CD99_receptor |
1.105e-02 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Monocytes(Nos)_source |
CD99_ligand |
Monocytes(Poor)_target |
CD99_receptor |
3.082e-02 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Monocytes(Poor)_source |
CD99_ligand |
Monocytes(Poor)_target |
CD99_receptor |
2.254e-02 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |