Sample overview

Project Name TCGA-HNSC
GSE ID GSE153559
GSM ID GSM4647118
Cell Line None
Tissue type primary tumor
Disease Type HPV+ HNSCC
PMID 33208941
Initial gene number 33307
Initial cell number 2371
Post-QC gene number 4337
Post-QC cell number 2125

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions