Sample overview

Project Name	TCGA-HNSC
GSE ID	GSE139324
GSM ID	GSM4138119
Cell Line	None
Tissue type	tumor tissue
Disease Type	Head and neck squamous cell carcinoma
PMID	31924475
Initial gene number	33694
Initial cell number	449
Post-QC gene number	156
Post-QC cell number	243

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions