Sample overview
| Project Name |
TCGA-GBM
|
| GSE ID |
GSE237673
|
| GSM ID |
GSM7635627
|
| Cell Line |
None
|
| Tissue type |
None
|
| Disease Type |
GBM
|
| PMID |
39475570
|
| Initial gene number |
33538
|
| Initial cell number |
1055
|
| Post-QC gene number |
309
|
| Post-QC cell number |
1055
|
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster
vs
There are no results of the analysis here
Overall Survival : Cluster
vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster
vs
There
are no results of the analysis here
Tumor Size : Cluster
vs
There
are no results of the analysis here
Lymph Node Involvement : Cluster
vs
There
are no results of the analysis here
Distant Metastasis : Cluster
vs
There
are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type |
Ligand |
Receiving Cell Type |
Receptor |
Score |
P-value |
Pathway Name |
Function |
Evidence |
| Neurons(Poor)_source |
CDH4_ligand |
Neurons(Good)_target |
CDH4_receptor |
1.491e-02 |
0.0 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Nos)_source |
CDH4_ligand |
Neurons(Nos)_target |
CDH4_receptor |
2.590e-02 |
0.04 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Poor)_source |
CDH4_ligand |
Neurons(Nos)_target |
CDH4_receptor |
2.480e-02 |
0.0 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Good)_source |
CDH4_ligand |
Neurons(Poor)_target |
CDH4_receptor |
1.491e-02 |
0.0 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Nos)_source |
CDH4_ligand |
Neurons(Poor)_target |
CDH4_receptor |
2.480e-02 |
0.0 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Poor)_source |
CDH4_ligand |
Neurons(Poor)_target |
CDH4_receptor |
2.284e-02 |
0.0 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Good)_source |
NCAM1_ligand |
Neurons(Good)_target |
NCAM1_receptor |
1.827e-02 |
0.0 |
NCAM |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Nos)_source |
NCAM1_ligand |
Neurons(Good)_target |
NCAM1_receptor |
2.152e-02 |
0.0 |
NCAM |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Poor)_source |
NCAM1_ligand |
Neurons(Good)_target |
NCAM1_receptor |
1.502e-02 |
0.0 |
NCAM |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Good)_source |
NCAM1_ligand |
Neurons(Nos)_target |
NCAM1_receptor |
2.152e-02 |
0.0 |
NCAM |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Good)_source |
NCAM1_ligand |
Neurons(Poor)_target |
NCAM1_receptor |
1.502e-02 |
0.0 |
NCAM |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Good)_source |
NRXN1_ligand |
Neurons(Good)_target |
NLGN1_receptor |
1.676e-02 |
0.0 |
NRXN |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Nos)_source |
NRXN1_ligand |
Neurons(Good)_target |
NLGN1_receptor |
2.554e-02 |
0.0 |
NRXN |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Poor)_source |
NRXN1_ligand |
Neurons(Good)_target |
NLGN1_receptor |
1.615e-02 |
0.0 |
NRXN |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Good)_source |
NRXN1_ligand |
Neurons(Nos)_target |
NLGN1_receptor |
2.401e-02 |
0.0 |
NRXN |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Nos)_source |
NRXN1_ligand |
Neurons(Nos)_target |
NLGN1_receptor |
3.659e-02 |
0.0 |
NRXN |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Poor)_source |
NRXN1_ligand |
Neurons(Nos)_target |
NLGN1_receptor |
2.311e-02 |
0.0 |
NRXN |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Good)_source |
NRXN1_ligand |
Neurons(Poor)_target |
NLGN1_receptor |
1.382e-02 |
0.01 |
NRXN |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neurons(Nos)_source |
NRXN1_ligand |
Neurons(Poor)_target |
NLGN1_receptor |
2.115e-02 |
0.01 |
NRXN |
Cell-Cell Contact |
KEGG: hsa04514 |