Sample overview

Project Name TCGA-ESCA
GSE ID GSE231540
GSM ID GSM7290606
Cell Line None
Tissue type Esophagus
Disease Type Esophageal squamous cell carcinoma
PMID 38217732
Initial gene number 28690
Initial cell number 1142
Post-QC gene number 28690
Post-QC cell number 1142

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions