Sample overview
| Project Name |
TCGA-COAD
|
| GSE ID |
GSE201348
|
| GSM ID |
GSM6061701
|
| Cell Line |
None
|
| Tissue type |
Colon
|
| Disease Type |
Polyp
|
| PMID |
35726067
|
| Initial gene number |
33538
|
| Initial cell number |
6756
|
| Post-QC gene number |
368
|
| Post-QC cell number |
6347
|
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster
vs
There are no results of the analysis here
Overall Survival : Cluster
vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster
vs
There
are no results of the analysis here
Tumor Size : Cluster
vs
There
are no results of the analysis here
Lymph Node Involvement : Cluster
vs
There
are no results of the analysis here
Distant Metastasis : Cluster
vs
There
are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type |
Ligand |
Receiving Cell Type |
Receptor |
Score |
P-value |
Pathway Name |
Function |
Evidence |
| Neutrophils(Nos)_source |
CDH1_ligand |
Adipocytes(Good)_target |
CDH1_receptor |
1.804e-12 |
0.02 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neutrophils(Nos)_source |
CDH1_ligand |
Adipocytes(Nos)_target |
CDH1_receptor |
7.054e-12 |
0.0 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Adipocytes(Good)_source |
CDH1_ligand |
Neutrophils(Nos)_target |
CDH1_receptor |
1.804e-12 |
0.02 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Adipocytes(Nos)_source |
CDH1_ligand |
Neutrophils(Nos)_target |
CDH1_receptor |
7.054e-12 |
0.0 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |
| Neutrophils(Nos)_source |
CDH1_ligand |
Neutrophils(Nos)_target |
CDH1_receptor |
6.673e-11 |
0.0 |
CDH |
Cell-Cell Contact |
KEGG: hsa04514 |