Sample overview
| Project Name |
TCGA-COAD
|
| GSE ID |
GSE201348
|
| GSM ID |
GSM6061668
|
| Cell Line |
None
|
| Tissue type |
Colon
|
| Disease Type |
Polyp
|
| PMID |
35726067
|
| Initial gene number |
33538
|
| Initial cell number |
50102
|
| Post-QC gene number |
683
|
| Post-QC cell number |
3318
|
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster
vs
There are no results of the analysis here
Overall Survival : Cluster
vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster
vs
There
are no results of the analysis here
Tumor Size : Cluster
vs
There
are no results of the analysis here
Lymph Node Involvement : Cluster
vs
There
are no results of the analysis here
Distant Metastasis : Cluster
vs
There
are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type |
Ligand |
Receiving Cell Type |
Receptor |
Score |
P-value |
Pathway Name |
Function |
Evidence |
| HSC(Good)_source |
LAMB1_ligand |
Erythrocytes(Good)_target |
CD44_receptor |
5.652e-09 |
0.03 |
LAMININ |
ECM-Receptor |
KEGG: hsa04512 |
| HSC(Good)_source |
LAMB1_ligand |
Erythrocytes(Nos)_target |
CD44_receptor |
1.476e-07 |
0.02 |
LAMININ |
ECM-Receptor |
KEGG: hsa04512 |
| HSC(Good)_source |
LAMB1_ligand |
HSC(Good)_target |
CD44_receptor |
3.422e-09 |
0.01 |
LAMININ |
ECM-Receptor |
KEGG: hsa04512 |
| HSC(Good)_source |
LAMB1_ligand |
HSC(Nos)_target |
CD44_receptor |
3.105e-07 |
0.0 |
LAMININ |
ECM-Receptor |
KEGG: hsa04512 |
| HSC(Good)_source |
LAMB1_ligand |
Neurons(Good)_target |
CD44_receptor |
5.983e-09 |
0.01 |
LAMININ |
ECM-Receptor |
KEGG: hsa04512 |
| HSC(Good)_source |
LAMB1_ligand |
Neurons(Nos)_target |
CD44_receptor |
1.115e-07 |
0.0 |
LAMININ |
ECM-Receptor |
KEGG: hsa04512 |