Sample overview

Project Name TCGA-CHOL
GSE ID GSE201425
GSM ID GSM6063534
Cell Line None
Tissue type lymph node
Disease Type Gallbladder Carcinoma
PMID 35982235
Initial gene number 33538
Initial cell number 3270
Post-QC gene number 4005
Post-QC cell number 2877

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions