Sample overview

Project Name TCGA-CHOL
GSE ID GSE201425
GSM ID GSM6063512
Cell Line None
Tissue type primary focus
Disease Type Distal Cholangiocarcinoma
PMID 35982235
Initial gene number 33538
Initial cell number 4147
Post-QC gene number 5112
Post-QC cell number 2142

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions