Sample overview
| Project Name |
TCGA-CESC
|
| GSE ID |
GSE208654
|
| GSM ID |
GSM6360692
|
| Cell Line |
None
|
| Tissue type |
Cervix
|
| Disease Type |
Cervical Cancer
|
| PMID |
36967539
|
| Initial gene number |
20615
|
| Initial cell number |
1593
|
| Post-QC gene number |
1487
|
| Post-QC cell number |
1526
|
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster
vs
There are no results of the analysis here
Overall Survival : Cluster
vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster
vs
There
are no results of the analysis here
Tumor Size : Cluster
vs
There
are no results of the analysis here
Lymph Node Involvement : Cluster
vs
There
are no results of the analysis here
Distant Metastasis : Cluster
vs
There
are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type |
Ligand |
Receiving Cell Type |
Receptor |
Score |
P-value |
Pathway Name |
Function |
Evidence |
| Adipocytes(Nos)_source |
MDK_ligand |
Epithelial,cells(Nos)_target |
SDC1_receptor |
1.628e-02 |
0.0 |
MK |
Secreted Signaling |
PMID: 28356350 |
| Epithelial,cells(Nos)_source |
MDK_ligand |
Epithelial,cells(Nos)_target |
SDC1_receptor |
1.128e-03 |
0.01 |
MK |
Secreted Signaling |
PMID: 28356350 |
| Adipocytes(Nos)_source |
MDK_ligand |
Adipocytes(Nos)_target |
SDC2_receptor |
4.367e-02 |
0.0 |
MK |
Secreted Signaling |
PMID: 28356350 |
| Adipocytes(Nos)_source |
MDK_ligand |
Adipocytes(Nos)_target |
LRP1_receptor |
9.423e-02 |
0.0 |
MK |
Secreted Signaling |
PMID: 28356350 |
| Adipocytes(Nos)_source |
PTN_ligand |
Epithelial,cells(Nos)_target |
SDC1_receptor |
3.217e-03 |
0.0 |
PTN |
Secreted Signaling |
PMID: 28356350; PMID: 25620911 |
| Adipocytes(Nos)_source |
PTN_ligand |
Adipocytes(Nos)_target |
SDC2_receptor |
7.303e-03 |
0.0 |
PTN |
Secreted Signaling |
PMID: 28356350; PMID: 25620911 |
| Adipocytes(Nos)_source |
SEMA3C_ligand |
Adipocytes(Nos)_target |
PLXND1_receptor |
3.677e-03 |
0.0 |
SEMA3 |
Secreted Signaling |
PMID: 27533782 |
| Adipocytes(Nos)_source |
FN1_ligand |
Adipocytes(Nos)_target |
ITGAV_ITGB1_receptor |
5.460e-03 |
0.0 |
FN1 |
ECM-Receptor |
KEGG: hsa04512 |
| Adipocytes(Nos)_source |
COL1A1_ligand |
Epithelial,cells(Nos)_target |
SDC1_receptor |
1.395e-02 |
0.0 |
COLLAGEN |
ECM-Receptor |
KEGG: hsa04512 |
| Adipocytes(Nos)_source |
COL1A2_ligand |
Epithelial,cells(Nos)_target |
SDC1_receptor |
2.208e-02 |
0.0 |
COLLAGEN |
ECM-Receptor |
KEGG: hsa04512 |
| Adipocytes(Nos)_source |
COL4A2_ligand |
Epithelial,cells(Nos)_target |
SDC1_receptor |
2.510e-03 |
0.0 |
COLLAGEN |
ECM-Receptor |
KEGG: hsa04512 |
| Adipocytes(Nos)_source |
COL6A1_ligand |
Epithelial,cells(Nos)_target |
SDC1_receptor |
1.584e-02 |
0.0 |
COLLAGEN |
ECM-Receptor |
KEGG: hsa04512 |
| Adipocytes(Nos)_source |
COL6A2_ligand |
Epithelial,cells(Nos)_target |
SDC1_receptor |
1.634e-02 |
0.0 |
COLLAGEN |
ECM-Receptor |
KEGG: hsa04512 |
| Adipocytes(Nos)_source |
COL6A3_ligand |
Adipocytes(Nos)_target |
SDC1_receptor |
6.467e-02 |
0.0 |
COLLAGEN |
ECM-Receptor |
KEGG: hsa04512 |
| Adipocytes(Nos)_source |
COL6A3_ligand |
Epithelial,cells(Nos)_target |
SDC1_receptor |
9.208e-03 |
0.0 |
COLLAGEN |
ECM-Receptor |
KEGG: hsa04512 |
| Adipocytes(Nos)_source |
FN1_ligand |
Epithelial,cells(Nos)_target |
SDC1_receptor |
3.412e-03 |
0.0 |
FN1 |
ECM-Receptor |
KEGG: hsa04512 |
| Adipocytes(Nos)_source |
TNXB_ligand |
Adipocytes(Nos)_target |
SDC1_receptor |
1.556e-02 |
0.0 |
TENASCIN |
ECM-Receptor |
KEGG: hsa04512 |
| Adipocytes(Nos)_source |
TNXB_ligand |
Epithelial,cells(Nos)_target |
SDC1_receptor |
2.315e-03 |
0.0 |
TENASCIN |
ECM-Receptor |
KEGG: hsa04512 |
| Adipocytes(Nos)_source |
APP_ligand |
Adipocytes(Nos)_target |
CD74_receptor |
2.174e-02 |
0.0 |
APP |
Cell-Cell Contact |
PMID: 19849849 |
| Epithelial,cells(Nos)_source |
CD46_ligand |
Adipocytes(Nos)_target |
JAG1_receptor |
3.318e-04 |
0.0 |
CD46 |
Cell-Cell Contact |
PMID: 23086448 |
| Adipocytes(Nos)_source |
CD99_ligand |
Adipocytes(Nos)_target |
CD99_receptor |
5.272e-02 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |