Sample overview

Project Name Breast Invasive Carcinoma
GSE ID GSE186344
GSM ID GSM5645908
Cell Line None
Tissue type Brain
Disease Type Breast Cancer Brain Metastasis
PMID 35063085
Initial gene number 33694
Initial cell number 6828
Post-QC gene number 10260
Post-QC cell number 6378

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions