Sample overview

Project Name TCGA-BLCA
GSE ID GSE130001
GSM ID GSM3729179
Cell Line None
Tissue type Tumor
Disease Type Urothelial Cancer
PMID 32111252
Initial gene number 32738
Initial cell number 601
Post-QC gene number 642
Post-QC cell number 572

QC Metrics

Bulk-to-ScRNA-seq Label Transfer

Bulk phenotype-associated subpopulations

Reference-Based Annotation

Differentially expressed genes

Overall Survival : Cluster vs

Overall Survival : Cluster vs ( + )

Clinical Stage : Cluster vs

Tumor Size : Cluster vs

Lymph Node Involvement : Cluster vs

Distant Metastasis : Cluster vs

Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )

Cell Population Signaling and Communication

Ligand-Receptor-Mediated Cell-Cell Interactions