Sample overview
| Project Name |
TARGET-NBL
|
| GSE ID |
GSE229224
|
| GSM ID |
GSM7157155
|
| Cell Line |
CHP134
|
| Tissue type |
None
|
| Disease Type |
Neuroblastoma
|
| PMID |
38898465
|
| Initial gene number |
33694
|
| Initial cell number |
4409
|
| Post-QC gene number |
8910
|
| Post-QC cell number |
508
|
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster
vs
There are no results of the analysis here
Overall Survival : Cluster
vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster
vs
There
are no results of the analysis here
Tumor Size : Cluster
vs
There
are no results of the analysis here
Lymph Node Involvement : Cluster
vs
There
are no results of the analysis here
Distant Metastasis : Cluster
vs
There
are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type |
Ligand |
Receiving Cell Type |
Receptor |
Score |
P-value |
Pathway Name |
Function |
Evidence |
| Erythrocytes(Nos)_source |
GDF11_ligand |
Erythrocytes(Good)_target |
ACVR1B_ACVR2B_receptor |
1.610e-05 |
0.03 |
GDF |
Secreted Signaling |
KEGG: hsa04350 |
| Erythrocytes(Nos)_source |
GDF11_ligand |
Erythrocytes(Nos)_target |
ACVR1B_ACVR2B_receptor |
2.258e-05 |
0.0 |
GDF |
Secreted Signaling |
KEGG: hsa04350 |
| Erythrocytes(Nos)_source |
CADM1_ligand |
Erythrocytes(Nos)_target |
CADM1_receptor |
6.539e-06 |
0.0 |
CADM |
Cell-Cell Contact |
PMID: 24503895 |
| Erythrocytes(Nos)_source |
NCAM1_ligand |
Erythrocytes(Good)_target |
NCAM1_receptor |
5.421e-04 |
0.01 |
NCAM |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Good)_source |
NCAM1_ligand |
Erythrocytes(Nos)_target |
NCAM1_receptor |
5.421e-04 |
0.01 |
NCAM |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Nos)_source |
NCAM1_ligand |
Erythrocytes(Nos)_target |
NCAM1_receptor |
1.117e-03 |
0.0 |
NCAM |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Poor)_source |
NCAM1_ligand |
Erythrocytes(Nos)_target |
NCAM1_receptor |
6.622e-04 |
0.0 |
NCAM |
Cell-Cell Contact |
KEGG: hsa04514 |
| Erythrocytes(Nos)_source |
NCAM1_ligand |
Erythrocytes(Poor)_target |
NCAM1_receptor |
6.622e-04 |
0.0 |
NCAM |
Cell-Cell Contact |
KEGG: hsa04514 |