Sample overview
| Project Name |
TARGET-ALL
|
| GSE ID |
GSE227122
|
| GSM ID |
GSM7092005
|
| Cell Line |
None
|
| Tissue type |
Bone Marrow
|
| Disease Type |
T-cell acute lymphoblastic leukemia
|
| PMID |
\
|
| Initial gene number |
33538
|
| Initial cell number |
3405
|
| Post-QC gene number |
4449
|
| Post-QC cell number |
138
|
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster
vs
There are no results of the analysis here
Overall Survival : Cluster
vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster
vs
There
are no results of the analysis here
Tumor Size : Cluster
vs
There
are no results of the analysis here
Lymph Node Involvement : Cluster
vs
There
are no results of the analysis here
Distant Metastasis : Cluster
vs
There
are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type |
Ligand |
Receiving Cell Type |
Receptor |
Score |
P-value |
Pathway Name |
Function |
Evidence |
| HSC(Nos)_source |
LGALS9_ligand |
HSC(Nos)_target |
PTPRC_receptor |
9.331e-03 |
0.0 |
GALECTIN |
Secreted Signaling |
PMID: 30120235 |
| HSC(Nos)_source |
ADGRE5_ligand |
HSC(Nos)_target |
CD55_receptor |
4.681e-03 |
0.0 |
ADGRE5 |
Cell-Cell Contact |
PMID: 11297558 |
| HSC(Nos)_source |
CD99_ligand |
HSC(Nos)_target |
CD99_receptor |
2.410e-01 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| HSC(Nos)_source |
ICAM2_ligand |
HSC(Nos)_target |
ITGAL_ITGB2_receptor |
6.897e-03 |
0.0 |
ICAM |
Cell-Cell Contact |
KEGG: hsa04514 |