Sample overview
| Project Name |
TARGET-ALL
|
| GSE ID |
GSE196214
|
| GSM ID |
GSM5862878
|
| Cell Line |
None
|
| Tissue type |
Bone Marrow
|
| Disease Type |
Relapse
|
| PMID |
\
|
| Initial gene number |
33538
|
| Initial cell number |
3198
|
| Post-QC gene number |
3881
|
| Post-QC cell number |
3124
|
Bulk-to-ScRNA-seq Label Transfer
Bulk phenotype-associated subpopulations
Reference-Based Annotation
Differentially expressed genes
Overall Survival : Cluster
vs
There are no results of the analysis here
Overall Survival : Cluster
vs ( + )
There are no results of the analysis here
Clinical Stage : Cluster
vs
There
are no results of the analysis here
Tumor Size : Cluster
vs
There
are no results of the analysis here
Lymph Node Involvement : Cluster
vs
There
are no results of the analysis here
Distant Metastasis : Cluster
vs
There
are no results of the analysis here
Cell-Cell communications ( Survival-Associated Subpopulations Across Cell Types )
Cell Population Signaling and Communication
Ligand-Receptor-Mediated Cell-Cell Interactions
| Sending Cell Type |
Ligand |
Receiving Cell Type |
Receptor |
Score |
P-value |
Pathway Name |
Function |
Evidence |
| CD4+,T-cells(Nos)_source |
TGFB1_ligand |
CD4+,T-cells(Nos)_target |
TGFbR1_R2_receptor |
1.810e-06 |
0.0 |
TGFb |
Secreted Signaling |
KEGG: hsa04350 |
| CD4+,T-cells(Nos)_source |
TGFB1_ligand |
Monocytes(Nos)_target |
TGFbR1_R2_receptor |
3.153e-05 |
0.0 |
TGFb |
Secreted Signaling |
KEGG: hsa04350 |
| Monocytes(Nos)_source |
TGFB1_ligand |
Monocytes(Nos)_target |
TGFbR1_R2_receptor |
1.677e-04 |
0.0 |
TGFb |
Secreted Signaling |
KEGG: hsa04350 |
| Monocytes(Nos)_source |
NAMPT_ligand |
Monocytes(Nos)_target |
INSR_receptor |
4.027e-03 |
0.0 |
VISFATIN |
Secreted Signaling |
PMID: 28490838 |
| Monocytes(Nos)_source |
LGALS9_ligand |
CD4+,T-cells(Nos)_target |
PTPRC_receptor |
9.060e-04 |
0.0 |
GALECTIN |
Secreted Signaling |
PMID: 30120235 |
| Monocytes(Nos)_source |
LGALS9_ligand |
Monocytes(Nos)_target |
PTPRC_receptor |
1.115e-02 |
0.01 |
GALECTIN |
Secreted Signaling |
PMID: 30120235 |
| Monocytes(Nos)_source |
LGALS9_ligand |
Monocytes(Nos)_target |
CD44_receptor |
1.252e-02 |
0.0 |
GALECTIN |
Secreted Signaling |
PMID: 25065622 |
| CD4+,T-cells(Nos)_source |
ADGRE5_ligand |
Monocytes(Nos)_target |
CD55_receptor |
5.484e-04 |
0.0 |
ADGRE5 |
Cell-Cell Contact |
PMID: 11297558 |
| Monocytes(Nos)_source |
CD22_ligand |
CD4+,T-cells(Nos)_target |
PTPRC_receptor |
4.153e-04 |
0.0 |
CD22 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Monocytes(Nos)_source |
CD22_ligand |
Monocytes(Nos)_target |
PTPRC_receptor |
5.092e-03 |
0.0 |
CD22 |
Cell-Cell Contact |
KEGG: hsa04514 |
| CD4+,T-cells(Nos)_source |
PTPRC_ligand |
Monocytes(Nos)_target |
CD22_receptor |
4.153e-04 |
0.0 |
CD45 |
Cell-Cell Contact |
PMID: 12115612 |
| Monocytes(Nos)_source |
PTPRC_ligand |
Monocytes(Nos)_target |
CD22_receptor |
5.092e-03 |
0.0 |
CD45 |
Cell-Cell Contact |
PMID: 12115612 |
| CD4+,T-cells(Nos)_source |
CD99_ligand |
CD4+,T-cells(Nos)_target |
CD99_receptor |
8.585e-06 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| Monocytes(Nos)_source |
CD99_ligand |
CD4+,T-cells(Nos)_target |
CD99_receptor |
9.424e-05 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |
| CD4+,T-cells(Nos)_source |
CD99_ligand |
Monocytes(Nos)_target |
CD99_receptor |
9.424e-05 |
0.0 |
CD99 |
Cell-Cell Contact |
KEGG: hsa04514 |